PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aqcoe4G246200.3.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; stem eudicotyledons; Ranunculales; Ranunculaceae; Thalictroideae; Aquilegia
Family bHLH
Protein Properties Length: 221aa    MW: 24983.8 Da    PI: 9.529
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aqcoe4G246200.3.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH309.6e-104591455
                       HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                        h ++Er RR+++ ++f  L +++P +     kK++K+++L   ++Y+ +Lq
  Aqcoe4G246200.3.p 45 DHVIAERMRREKLSQRFIDLATIVPGL-----KKMDKSSVLGDCINYLIQLQ 91
                       6999***********************.....9*****************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088813.444190IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.102.7E-1345101IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.83E-1445103IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000102.8E-74691IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.50E-94695No hitNo description
SMARTSM003533.3E-104796IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF550217.63E-5143215No hitNo description
Gene3DG3DSA:3.30.70.2602.9E-5145208No hitNo description
CDDcd021160.00513151207No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 221 aa     Download sequence    Send to blast
MASWSNAKWT PISVMTSPGN CWHQNKVNKR SCRPHPKTPA SSPQDHVIAE RMRREKLSQR  60
FIDLATIVPG LKKMDKSSVL GDCINYLIQL QKRVKTLEEQ PSTKAFVKKF QIISAGSDDS  120
SSMDTDNFIN GGSEEPLLEI EARNSDRNVL IRIHCENRKG LLLKALMEIE KLNLSVVNLN  180
SVPFGTSTLD ITVKAEVIFY IDVKSHDGNI WMKNIEKFQW *
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_012079597.17e-55PREDICTED: transcription factor bHLH18-like
RefseqXP_016475882.18e-56PREDICTED: transcription factor bHLH25-like
SwissprotQ9T0722e-37BH025_ARATH; Transcription factor bHLH25
TrEMBLA0A0M4B4C02e-55A0A0M4B4C0_9APIA; BHLH transcription factor
STRINGSi036393m6e-54(Setaria italica)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G37850.11e-38bHLH family protein